STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD11262.1Luciferase-like. (287 aa)    
Predicted Functional Partners:
ABD10126.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.725
ABD10125.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
  
 0.681
ABD10793.1
Mycobacterium tuberculosis paralogous family 11.
  
   
 0.666
ABD09453.1
Conserved hypothetical protein.
  
     0.647
ABD10129.1
FO synthase subunit 1.
 
  
 0.581
ABD11261.1
Transcriptional regulator, MerR family.
       0.556
ABD12033.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.549
ABD13689.1
Conserved hypothetical protein.
  
     0.526
ABD12121.1
Luciferase-like.
  
     0.501
fbiD
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.486
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.