STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD11596.1Phage shock protein A, PspA. (251 aa)    
Predicted Functional Partners:
ABD11597.1
Conserved hypothetical protein.
 
     0.958
ABD10162.1
Putative PAS/PAC sensor protein.
    
 
 0.946
ABD11599.1
Conserved hypothetical protein.
 
     0.901
ABD12275.1
Hypothetical protein.
  
 
 0.872
htpX-2
Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family.
 
    0.732
ABD13037.1
Histidine kinase.
    
 
 0.709
ABD11595.1
Conserved hypothetical protein.
       0.598
ABD11524.1
PAS/PAC sensor hybrid histidine kinase.
    
 
 0.579
ABD13264.1
Conserved hypothetical protein.
  
     0.520
groS
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
   
  
 0.477
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.