Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09550.1 | ABD11697.1 | Francci3_0158 | Francci3_2329 | Conserved hypothetical protein. | Hypothetical protein. | 0.414 |
ABD10374.1 | ABD10494.1 | Francci3_0991 | Francci3_1114 | Acyl transferase region. | Polyketide synthase-like. | 0.986 |
ABD10374.1 | ABD10495.1 | Francci3_0991 | Francci3_1115 | Acyl transferase region. | Acyl transferase region. | 0.996 |
ABD10374.1 | ABD11697.1 | Francci3_0991 | Francci3_2329 | Acyl transferase region. | Hypothetical protein. | 0.638 |
ABD10374.1 | ABD11699.1 | Francci3_0991 | Francci3_2331 | Acyl transferase region. | Putative protease. | 0.643 |
ABD10374.1 | ABD12338.1 | Francci3_0991 | Francci3_2981 | Acyl transferase region. | Beta-ketoacyl synthase. | 0.994 |
ABD10494.1 | ABD10374.1 | Francci3_1114 | Francci3_0991 | Polyketide synthase-like. | Acyl transferase region. | 0.986 |
ABD10494.1 | ABD10495.1 | Francci3_1114 | Francci3_1115 | Polyketide synthase-like. | Acyl transferase region. | 0.999 |
ABD10494.1 | ABD11697.1 | Francci3_1114 | Francci3_2329 | Polyketide synthase-like. | Hypothetical protein. | 0.481 |
ABD10494.1 | ABD11699.1 | Francci3_1114 | Francci3_2331 | Polyketide synthase-like. | Putative protease. | 0.496 |
ABD10494.1 | ABD12338.1 | Francci3_1114 | Francci3_2981 | Polyketide synthase-like. | Beta-ketoacyl synthase. | 0.969 |
ABD10495.1 | ABD10374.1 | Francci3_1115 | Francci3_0991 | Acyl transferase region. | Acyl transferase region. | 0.996 |
ABD10495.1 | ABD10494.1 | Francci3_1115 | Francci3_1114 | Acyl transferase region. | Polyketide synthase-like. | 0.999 |
ABD10495.1 | ABD11697.1 | Francci3_1115 | Francci3_2329 | Acyl transferase region. | Hypothetical protein. | 0.635 |
ABD10495.1 | ABD11699.1 | Francci3_1115 | Francci3_2331 | Acyl transferase region. | Putative protease. | 0.635 |
ABD10495.1 | ABD12338.1 | Francci3_1115 | Francci3_2981 | Acyl transferase region. | Beta-ketoacyl synthase. | 0.999 |
ABD10730.1 | ABD11697.1 | Francci3_1353 | Francci3_2329 | Conserved hypothetical protein. | Hypothetical protein. | 0.449 |
ABD11697.1 | ABD09550.1 | Francci3_2329 | Francci3_0158 | Hypothetical protein. | Conserved hypothetical protein. | 0.414 |
ABD11697.1 | ABD10374.1 | Francci3_2329 | Francci3_0991 | Hypothetical protein. | Acyl transferase region. | 0.638 |
ABD11697.1 | ABD10494.1 | Francci3_2329 | Francci3_1114 | Hypothetical protein. | Polyketide synthase-like. | 0.481 |
page 1 of 2