Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09666.1 | ABD12072.1 | Francci3_0279 | Francci3_2711 | Pyridoxal-dependent decarboxylase. | Pyridoxal-dependent decarboxylase. | 0.929 |
ABD09666.1 | ABD13404.1 | Francci3_0279 | Francci3_4054 | Pyridoxal-dependent decarboxylase. | Diaminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.921 |
ABD09666.1 | ABD13405.1 | Francci3_0279 | Francci3_4055 | Pyridoxal-dependent decarboxylase. | Pyridoxal-dependent decarboxylase. | 0.929 |
ABD09666.1 | ABD13408.1 | Francci3_0279 | Francci3_4058 | Pyridoxal-dependent decarboxylase. | IucA/IucC. | 0.408 |
ABD12069.1 | ABD12070.1 | Francci3_2708 | Francci3_2709 | Transposase, IS4 family. | Hypothetical protein. | 0.430 |
ABD12069.1 | ABD12071.1 | Francci3_2708 | Francci3_2710 | Transposase, IS4 family. | Hypothetical protein. | 0.430 |
ABD12069.1 | ABD12072.1 | Francci3_2708 | Francci3_2711 | Transposase, IS4 family. | Pyridoxal-dependent decarboxylase. | 0.430 |
ABD12070.1 | ABD12069.1 | Francci3_2709 | Francci3_2708 | Hypothetical protein. | Transposase, IS4 family. | 0.430 |
ABD12070.1 | ABD12071.1 | Francci3_2709 | Francci3_2710 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ABD12070.1 | ABD12072.1 | Francci3_2709 | Francci3_2711 | Hypothetical protein. | Pyridoxal-dependent decarboxylase. | 0.773 |
ABD12070.1 | ABD12073.1 | Francci3_2709 | Francci3_2712 | Hypothetical protein. | Transposase, IS4 family. | 0.418 |
ABD12071.1 | ABD12069.1 | Francci3_2710 | Francci3_2708 | Hypothetical protein. | Transposase, IS4 family. | 0.430 |
ABD12071.1 | ABD12070.1 | Francci3_2710 | Francci3_2709 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ABD12071.1 | ABD12072.1 | Francci3_2710 | Francci3_2711 | Hypothetical protein. | Pyridoxal-dependent decarboxylase. | 0.773 |
ABD12071.1 | ABD12073.1 | Francci3_2710 | Francci3_2712 | Hypothetical protein. | Transposase, IS4 family. | 0.418 |
ABD12072.1 | ABD09666.1 | Francci3_2711 | Francci3_0279 | Pyridoxal-dependent decarboxylase. | Pyridoxal-dependent decarboxylase. | 0.929 |
ABD12072.1 | ABD12069.1 | Francci3_2711 | Francci3_2708 | Pyridoxal-dependent decarboxylase. | Transposase, IS4 family. | 0.430 |
ABD12072.1 | ABD12070.1 | Francci3_2711 | Francci3_2709 | Pyridoxal-dependent decarboxylase. | Hypothetical protein. | 0.773 |
ABD12072.1 | ABD12071.1 | Francci3_2711 | Francci3_2710 | Pyridoxal-dependent decarboxylase. | Hypothetical protein. | 0.773 |
ABD12072.1 | ABD12073.1 | Francci3_2711 | Francci3_2712 | Pyridoxal-dependent decarboxylase. | Transposase, IS4 family. | 0.418 |
page 1 of 3