Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09499.1 | Krm | Francci3_0105 | Francci3_3372 | Hypothetical protein. | Ribosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. | 0.558 |
ABD09551.1 | ABD12100.1 | Francci3_0159 | Francci3_2740 | Hypothetical protein. | Hypothetical protein. | 0.639 |
ABD09551.1 | Krm | Francci3_0159 | Francci3_3372 | Hypothetical protein. | Ribosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. | 0.724 |
ABD12100.1 | ABD09551.1 | Francci3_2740 | Francci3_0159 | Hypothetical protein. | Hypothetical protein. | 0.639 |
ABD12100.1 | Krm | Francci3_2740 | Francci3_3372 | Hypothetical protein. | Ribosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. | 0.512 |
ABD12716.1 | ABD12721.1 | Francci3_3361 | Francci3_3366 | Hypothetical protein. | Radical SAM. | 0.709 |
ABD12716.1 | ABD12722.1 | Francci3_3361 | Francci3_3367 | Hypothetical protein. | Hypothetical protein. | 0.709 |
ABD12716.1 | ABD12723.1 | Francci3_3361 | Francci3_3368 | Hypothetical protein. | Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | 0.709 |
ABD12716.1 | ABD12724.1 | Francci3_3361 | Francci3_3369 | Hypothetical protein. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.709 |
ABD12716.1 | ABD12725.1 | Francci3_3361 | Francci3_3370 | Hypothetical protein. | Cobalamin B12-binding. | 0.709 |
ABD12716.1 | ABD12726.1 | Francci3_3361 | Francci3_3371 | Hypothetical protein. | FAD dependent oxidoreductase. | 0.709 |
ABD12716.1 | Krm | Francci3_3361 | Francci3_3372 | Hypothetical protein. | Ribosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. | 0.496 |
ABD12721.1 | ABD12716.1 | Francci3_3366 | Francci3_3361 | Radical SAM. | Hypothetical protein. | 0.709 |
ABD12721.1 | ABD12722.1 | Francci3_3366 | Francci3_3367 | Radical SAM. | Hypothetical protein. | 0.774 |
ABD12721.1 | ABD12723.1 | Francci3_3366 | Francci3_3368 | Radical SAM. | Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family. | 0.773 |
ABD12721.1 | ABD12724.1 | Francci3_3366 | Francci3_3369 | Radical SAM. | Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.779 |
ABD12721.1 | ABD12725.1 | Francci3_3366 | Francci3_3370 | Radical SAM. | Cobalamin B12-binding. | 0.875 |
ABD12721.1 | ABD12726.1 | Francci3_3366 | Francci3_3371 | Radical SAM. | FAD dependent oxidoreductase. | 0.773 |
ABD12721.1 | Krm | Francci3_3366 | Francci3_3372 | Radical SAM. | Ribosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. | 0.536 |
ABD12722.1 | ABD12716.1 | Francci3_3367 | Francci3_3361 | Hypothetical protein. | Hypothetical protein. | 0.709 |
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