STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KrmRibosomal RNA methyltransferase; Specifically methylates the N(7) position of guanine 1405 in 16S rRNA. Confers resistance to various aminoglycosides, including gentamicin and kanamycin. (284 aa)    
Predicted Functional Partners:
ABD09551.1
Hypothetical protein.
  
     0.724
ABD12722.1
Hypothetical protein.
 
     0.619
ABD09499.1
Hypothetical protein.
  
     0.558
ABD12721.1
Radical SAM.
       0.536
ABD12723.1
Aminoglycoside phosphotransferase; Belongs to the aminoglycoside phosphotransferase family.
       0.536
ABD12724.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.536
ABD12725.1
Cobalamin B12-binding.
       0.536
ABD12726.1
FAD dependent oxidoreductase.
       0.536
ABD12100.1
Hypothetical protein.
  
     0.512
ABD12716.1
Hypothetical protein.
       0.496
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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