Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD10023.1 | ABD10444.1 | Francci3_0639 | Francci3_1062 | Hypothetical protein. | Membrane protein. | 0.603 |
ABD10023.1 | ABD10773.1 | Francci3_0639 | Francci3_1396 | Hypothetical protein. | FAD dependent oxidoreductase. | 0.774 |
ABD10023.1 | ABD10876.1 | Francci3_0639 | Francci3_1500 | Hypothetical protein. | Amidinotransferase. | 0.783 |
ABD10023.1 | ABD11756.1 | Francci3_0639 | Francci3_2389 | Hypothetical protein. | Putative integral membrane protein. | 0.493 |
ABD10023.1 | ABD12424.1 | Francci3_0639 | Francci3_3067 | Hypothetical protein. | Hypothetical protein. | 0.774 |
ABD10023.1 | ABD13023.1 | Francci3_0639 | Francci3_3671 | Hypothetical protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.762 |
ABD10023.1 | ABD13024.1 | Francci3_0639 | Francci3_3672 | Hypothetical protein. | Hypothetical protein. | 0.774 |
ABD10023.1 | ABD13287.1 | Francci3_0639 | Francci3_3937 | Hypothetical protein. | Membrane protein. | 0.631 |
ABD10023.1 | ABD13755.1 | Francci3_0639 | Francci3_4409 | Hypothetical protein. | Hypothetical protein. | 0.774 |
ABD10023.1 | ABD13802.1 | Francci3_0639 | Francci3_4456 | Hypothetical protein. | Peptidoglycan-binding domain 1. | 0.780 |
ABD10444.1 | ABD10023.1 | Francci3_1062 | Francci3_0639 | Membrane protein. | Hypothetical protein. | 0.603 |
ABD10444.1 | ABD10773.1 | Francci3_1062 | Francci3_1396 | Membrane protein. | FAD dependent oxidoreductase. | 0.611 |
ABD10444.1 | ABD10876.1 | Francci3_1062 | Francci3_1500 | Membrane protein. | Amidinotransferase. | 0.495 |
ABD10444.1 | ABD12424.1 | Francci3_1062 | Francci3_3067 | Membrane protein. | Hypothetical protein. | 0.556 |
ABD10444.1 | ABD13023.1 | Francci3_1062 | Francci3_3671 | Membrane protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.769 |
ABD10444.1 | ABD13024.1 | Francci3_1062 | Francci3_3672 | Membrane protein. | Hypothetical protein. | 0.609 |
ABD10444.1 | ABD13802.1 | Francci3_1062 | Francci3_4456 | Membrane protein. | Peptidoglycan-binding domain 1. | 0.606 |
ABD10773.1 | ABD10023.1 | Francci3_1396 | Francci3_0639 | FAD dependent oxidoreductase. | Hypothetical protein. | 0.774 |
ABD10773.1 | ABD10444.1 | Francci3_1396 | Francci3_1062 | FAD dependent oxidoreductase. | Membrane protein. | 0.611 |
ABD10773.1 | ABD10876.1 | Francci3_1396 | Francci3_1500 | FAD dependent oxidoreductase. | Amidinotransferase. | 0.773 |
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