STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD13331.1Serine/threonine protein kinase. (732 aa)    
Predicted Functional Partners:
ABD13782.1
Serine/threonine protein kinase.
 
 
 0.528
ABD13880.1
Serine/threonine protein kinase.
  
     0.518
ABD12434.1
Serine/threonine protein kinase.
 
 
 0.512
ABD13330.1
Transcriptional regulator, TetR family.
 
     0.497
ABD10845.1
FHA domain containing protein.
    
 
 0.487
ABD12493.1
Serine/threonine protein kinase.
  
     0.433
ABD10756.1
Transcriptional regulator, XRE family.
  
 
   0.424
ABD13778.1
Protein serine/threonine phosphatases.
 
 
 0.421
ABD13776.1
FHA domain containing protein.
 
 
 
 0.419
ABD09433.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.