STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABD13574.1Hemerythrin HHE cation binding region. (196 aa)    
Predicted Functional Partners:
ABD11585.1
Protein of unknown function DUF1360.
 
     0.597
ABD10178.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.573
ABD10246.1
Assimilatory nitrate reductase (NADH) beta subunit.
  
 
 0.573
ABD11290.1
BFD-like (2Fe-2S)-binding region.
  
 
 0.573
ABD09873.1
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase.
  
  
 0.558
ABD09912.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.558
ABD10180.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.558
ABD12431.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.515
ABD13399.1
GAF sensor hybrid histidine kinase.
 
     0.509
ABD11274.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
     0.492
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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