STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MELS_00024-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)    
Predicted Functional Partners:
MELS_2160
Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family.
 0.945
MELS_1156
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 0.944
MELS_0336
Alcohol dehydrogenase.
  
 
 0.904
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.904
MELS_1666
2-hydroxy-3-oxopropionate reductase.
     
  0.900
MELS_0670
Phosphate acetyltransferase.
    
 0.810
MELS_0889
Phosphate acetyltransferase.
    
 0.810
MELS_2128
acyl-CoA dehydrogenase.
   
 
 0.807
MELS_0464
acetyl-coA:acetoacetyl-coA transferase alpha subunit; Belongs to the 3-oxoacid CoA-transferase family.
     
  0.800
MELS_0742
Coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.
     
  0.800
Your Current Organism:
Megasphaera elsdenii
NCBI taxonomy Id: 1064535
Other names: M. elsdenii DSM 20460, Megasphaera elsdenii ATCC 25940, Megasphaera elsdenii DSM 20460, Megasphaera elsdenii LC1, Megasphaera elsdenii str. DSM 20460, Megasphaera elsdenii strain DSM 20460
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