STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCAS0C02960PseudoU_synth_2 domain-containing protein. (255 aa)    
Predicted Functional Partners:
NCAS0B01610
TRUD domain-containing protein.
    
 
 0.770
NCAS0B07480
Mrpl_C domain-containing protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.601
NCAS0A12760
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.599
NCAS0A09910
TruB_N domain-containing protein.
  
 
 0.565
NCAS0C04900
PUA domain-containing protein.
  
 
 0.557
NCAS0B04790
PseudoU_synth_1 domain-containing protein.
  
  
 0.551
NCAS0A07880
CP-type G domain-containing protein.
   
 
 0.549
NCAS0B01750
SpoU_sub_bind domain-containing protein.
  
 
 0.547
NCAS0J01790
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.547
NCAS0J01970
Uncharacterized protein.
    
 
 0.545
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 1064592
Other names: N. castellii CBS 4309, Naumovozyma castellii CBS 4309
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.