STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCAS0I00990RRM domain-containing protein. (300 aa)    
Predicted Functional Partners:
NCAS0B05250
Sm domain-containing protein.
   
 0.987
NCAS0B02600
Uncharacterized protein.
    
 
 0.987
NCAS0E03280
RRM domain-containing protein.
   
 0.987
NCAS0D03090
Matrin-type domain-containing protein.
    
 0.986
NCAS0B02650
Uncharacterized protein.
   
 
 0.985
NCAS0C05110
Uncharacterized protein.
    
 
 0.985
NCAS0G04220
Uncharacterized protein.
   
 
 0.985
NCAS0H01810
Uncharacterized protein.
    
 
 0.985
NCAS0J00830
PWI domain-containing protein.
   
 
 0.985
NCAS0B05800
Uncharacterized protein.
    
 
 0.982
Your Current Organism:
Naumovozyma castellii
NCBI taxonomy Id: 1064592
Other names: N. castellii CBS 4309, Naumovozyma castellii CBS 4309
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.