STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_045680Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
C1H46_040580
Ribosomal_L2_C domain-containing protein.
   
 
 0.621
C1H46_026333
Intron_maturas2 domain-containing protein.
  
   
 0.615
C1H46_033261
Intron_maturas2 domain-containing protein.
  
   
 0.611
C1H46_044325
Uncharacterized protein.
  
   
 0.606
C1H46_011307
Uncharacterized protein.
  
 
   0.576
C1H46_002398
Ribosomal_L2_C domain-containing protein.
   
 
 0.560
C1H46_034918
Uncharacterized protein.
    
 
 0.543
C1H46_007767
Uncharacterized protein.
    
 
 0.543
C1H46_039084
Uncharacterized protein.
    
 
 0.537
C1H46_022375
PPR_long domain-containing protein.
    
 
 0.534
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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