STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_045475C2H2-type domain-containing protein. (110 aa)    
Predicted Functional Partners:
C1H46_042571
Nop domain-containing protein.
   
 
 0.831
C1H46_021208
Nop domain-containing protein.
   
 
 0.831
C1H46_043076
G-patch domain-containing protein.
   
 
 0.725
C1H46_007406
G-patch domain-containing protein.
   
 
 0.725
C1H46_031468
Uncharacterized protein.
   
 
 0.681
C1H46_014935
Uncharacterized protein.
   
 
 0.681
C1H46_011261
Uncharacterized protein.
   
 
 0.681
C1H46_020895
Brix domain-containing protein.
   
   0.672
C1H46_016273
RRM domain-containing protein.
   
   0.670
C1H46_014895
RRM domain-containing protein.
   
   0.670
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.