STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_044589Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
C1H46_017281
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.996
C1H46_012409
Ribosomal_TL5_C domain-containing protein.
  
 
 0.996
C1H46_029299
Uncharacterized protein.
  
 
 0.993
C1H46_009655
Uncharacterized protein.
  
 
 0.993
C1H46_020734
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.992
C1H46_011744
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.992
C1H46_035960
Uncharacterized protein.
  
 
 0.990
C1H46_032490
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.990
C1H46_028321
Uncharacterized protein.
  
 
 0.990
C1H46_027631
Uncharacterized protein.
  
 
 0.990
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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