STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_043446C2 NT-type domain-containing protein. (1013 aa)    
Predicted Functional Partners:
C1H46_035517
Uncharacterized protein.
  
     0.518
C1H46_041405
Uncharacterized protein.
  
     0.517
C1H46_014763
Uncharacterized protein.
  
     0.504
C1H46_005639
BHLH domain-containing protein.
  
     0.481
C1H46_027799
BHLH domain-containing protein.
  
     0.480
C1H46_010312
Uncharacterized protein.
  
     0.477
C1H46_002411
BHLH domain-containing protein.
  
     0.476
C1H46_017330
Uncharacterized protein.
  
     0.471
C1H46_006811
Uncharacterized protein.
  
     0.471
C1H46_019461
Uncharacterized protein.
  
     0.466
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.