STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_042242POTRA domain-containing protein. (696 aa)    
Predicted Functional Partners:
C1H46_033648
TPR_REGION domain-containing protein.
   
 0.674
C1H46_009807
TPR_REGION domain-containing protein.
   
 0.674
C1H46_019677
Uncharacterized protein.
     
 0.663
C1H46_021340
PsbP domain-containing protein.
 
 
 0.598
C1H46_036862
PsbP domain-containing protein.
 
 
 0.591
C1H46_042264
Uncharacterized protein.
    
 
 0.559
C1H46_044063
Uncharacterized protein.
  
  
 0.543
C1H46_039381
Pex2_Pex12 domain-containing protein.
     
 0.542
C1H46_012916
Pex2_Pex12 domain-containing protein.
     
 0.542
C1H46_010152
Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.
    
 
 0.532
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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