STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_040504AB hydrolase-1 domain-containing protein. (526 aa)    
Predicted Functional Partners:
C1H46_005368
Uncharacterized protein.
    
 0.727
C1H46_002181
Isochorismatase domain-containing protein.
  
 0.681
C1H46_002678
Uncharacterized protein.
    
 0.662
C1H46_013245
Nitroreductase domain-containing protein.
  
 
 0.636
C1H46_031791
Uncharacterized protein.
   
 
 0.590
C1H46_001522
Mg-por_mtran_C domain-containing protein.
   
 
 0.590
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 
 0.568
C1H46_038738
E1_dh domain-containing protein.
  
 0.561
C1H46_024951
E1_dh domain-containing protein.
  
 0.561
C1H46_021061
E1_dh domain-containing protein.
  
 0.561
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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