STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_040199Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
C1H46_042756
Uncharacterized protein.
   
 
  0.762
C1H46_023591
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
   
 
  0.762
C1H46_016400
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.607
C1H46_005368
Uncharacterized protein.
     
 0.591
C1H46_045286
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  
 0.544
C1H46_021267
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  
 0.544
C1H46_010306
Plastocyanin-like domain-containing protein.
  
     0.533
C1H46_026888
Uncharacterized protein.
  
  
 
0.515
C1H46_044090
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
   
 
  0.484
C1H46_015174
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
   
 
  0.484
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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