STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_039928TFIIIC_sub6 domain-containing protein. (165 aa)    
Predicted Functional Partners:
C1H46_042731
Uncharacterized protein.
  
     0.526
C1H46_041380
Uncharacterized protein.
  
     0.519
C1H46_041429
Phytocyanin domain-containing protein.
  
     0.513
C1H46_035929
Uncharacterized protein.
  
     0.508
C1H46_008791
Uncharacterized protein.
  
   
 0.485
C1H46_039840
Uncharacterized protein.
      
 0.481
C1H46_033733
Uncharacterized protein.
      
 0.481
C1H46_031374
Uncharacterized protein.
      
 0.481
C1H46_027412
Hydrolase_4 domain-containing protein.
      
 0.481
C1H46_036337
Uncharacterized protein.
  
     0.477
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.