STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_037977LOB domain-containing protein. (176 aa)    
Predicted Functional Partners:
C1H46_045004
Uncharacterized protein.
  
     0.530
C1H46_043335
Uncharacterized protein.
  
     0.529
C1H46_040437
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.525
C1H46_017335
Uncharacterized protein.
  
     0.522
C1H46_004230
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.522
C1H46_045310
Tub domain-containing protein; Belongs to the TUB family.
  
     0.519
C1H46_010060
Uncharacterized protein.
  
     0.517
C1H46_007499
Uncharacterized protein.
  
     0.516
C1H46_019630
DUF3490 domain-containing protein.
  
     0.515
C1H46_032545
Uncharacterized protein.
  
     0.514
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.