STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_036565RRM domain-containing protein. (113 aa)    
Predicted Functional Partners:
C1H46_042911
Uncharacterized protein.
   
 0.997
C1H46_000379
Sm domain-containing protein.
   
  0.997
C1H46_023484
Uncharacterized protein.
   
 0.996
C1H46_007324
Uncharacterized protein.
    
 0.992
C1H46_004248
Matrin-type domain-containing protein.
   
 0.991
C1H46_025464
Small nuclear ribonucleoprotein G.
   
  0.990
C1H46_014188
Small nuclear ribonucleoprotein G.
   
  0.990
C1H46_045204
RRM domain-containing protein.
    
 0.988
C1H46_028760
CPSF_A domain-containing protein.
    
 0.988
C1H46_028752
Uncharacterized protein.
    
 0.988
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.