STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_032851HTH myb-type domain-containing protein. (324 aa)    
Predicted Functional Partners:
C1H46_010199
Uncharacterized protein.
    
 0.656
C1H46_018080
Uncharacterized protein.
    
  0.513
C1H46_013024
Ubiquitin-like domain-containing protein.
    
 0.510
C1H46_008205
Ubiquitin-like domain-containing protein.
    
 0.510
C1H46_006798
Uncharacterized protein.
   
 
  0.502
C1H46_041088
SGF29 C-terminal domain-containing protein.
    
 0.486
C1H46_033569
Uncharacterized protein.
    
 0.486
C1H46_016280
SGF29 C-terminal domain-containing protein.
    
 0.486
C1H46_034531
WD_REPEATS_REGION domain-containing protein.
    
  0.465
C1H46_026733
WD_REPEATS_REGION domain-containing protein.
    
  0.465
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.