STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_030644Ion_trans domain-containing protein. (331 aa)    
Predicted Functional Partners:
C1H46_024963
Uncharacterized protein.
  
 
 
 0.770
C1H46_045281
Ion_trans domain-containing protein.
  
 
 
0.730
C1H46_017221
Uncharacterized protein.
  
 
 
0.710
C1H46_023941
Uncharacterized protein.
  
 
 
0.709
C1H46_017224
Uncharacterized protein.
  
 
 
0.709
C1H46_042834
Uncharacterized protein.
    
 
0.705
C1H46_038352
Uncharacterized protein.
    
 
 0.705
C1H46_001775
Uncharacterized protein.
      
 0.414
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.