STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_029995Amino_oxidase domain-containing protein. (558 aa)    
Predicted Functional Partners:
C1H46_037581
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.950
C1H46_021807
PABS domain-containing protein.
     
 0.935
C1H46_019819
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.935
C1H46_009757
PABS domain-containing protein.
     
 0.935
C1H46_042548
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.929
C1H46_033060
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.929
C1H46_001349
Uncharacterized protein.
  
  
0.926
C1H46_022793
Uncharacterized protein.
  
  
0.924
C1H46_040819
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
     
 0.921
C1H46_039069
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
     
 0.921
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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