STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (116 aa)    
Predicted Functional Partners:
C1H46_045157
Uncharacterized protein.
  
 
 0.986
C1H46_033284
Uncharacterized protein.
  
 
 0.986
C1H46_029348
Uncharacterized protein.
  
 
 0.986
C1H46_007061
Ribosomal_L7Ae domain-containing protein.
   
 
 0.985
C1H46_004760
Ribosomal_L7Ae domain-containing protein.
   
 
 0.985
C1H46_033777
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.984
C1H46_033250
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.984
C1H46_026324
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.984
C1H46_001218
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.983
C1H46_000888
U1-type domain-containing protein.
  
 
 0.980
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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