STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_027426GUB_WAK_bind domain-containing protein. (280 aa)    
Predicted Functional Partners:
C1H46_000691
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
 
 
 0.623
C1H46_031959
Rx_N domain-containing protein.
  
 
 
 0.614
C1H46_018848
Rx_N domain-containing protein.
  
 
 
 0.566
C1H46_015547
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
    
 
 0.530
C1H46_006047
F-box domain-containing protein.
  
  0.530
C1H46_004068
Homeobox domain-containing protein.
  
 
   0.520
C1H46_015543
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
    
 
 0.517
C1H46_041709
PB1 domain-containing protein.
  
 
  0.494
C1H46_023301
Uncharacterized protein.
  
     0.494
C1H46_003650
Fn3_6 domain-containing protein.
  
 
   0.494
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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