STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_026953F-box domain-containing protein. (597 aa)    
Predicted Functional Partners:
C1H46_003016
RuvB-like helicase; Belongs to the RuvB family.
    
 0.861
C1H46_007234
Uncharacterized protein; Belongs to the actin family.
    
 0.814
C1H46_023333
Uncharacterized protein.
    
 0.801
C1H46_011243
Uncharacterized protein; Belongs to the actin family.
   
 0.727
C1H46_002636
Uncharacterized protein.
   
 0.727
C1H46_018363
Uncharacterized protein.
    
 0.699
C1H46_006979
Uncharacterized protein.
    
 0.699
C1H46_012281
Uncharacterized protein.
    
  0.697
C1H46_001061
Uncharacterized protein.
    
  0.697
C1H46_041838
General transcription factor IIH subunit.
    
 0.676
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.