STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_022459Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
C1H46_042274
Uncharacterized protein.
  
     0.502
C1H46_020260
Uncharacterized protein.
  
     0.498
C1H46_038547
F-box domain-containing protein.
  
     0.496
C1H46_013417
Uncharacterized protein.
  
     0.494
C1H46_033959
F-box domain-containing protein.
  
     0.487
C1H46_016384
F-box domain-containing protein.
  
     0.485
C1H46_016387
F-box domain-containing protein.
  
     0.478
C1H46_000314
Uncharacterized protein.
  
     0.478
C1H46_036481
F-box domain-containing protein.
  
     0.474
C1H46_002812
F-box domain-containing protein.
  
     0.474
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.