STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_016130Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
C1H46_005562
Glycosyltransferase.
  
   
 0.516
C1H46_019677
Uncharacterized protein.
      
 0.473
C1H46_024311
Glycosyltransferase.
  
   
 0.453
C1H46_005534
Uncharacterized protein.
  
     0.436
C1H46_018415
Uncharacterized protein.
  
     0.425
C1H46_004100
Uncharacterized protein.
  
     0.423
C1H46_041599
Galectin domain-containing protein.
      
 0.418
C1H46_036393
Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.418
C1H46_029095
Galectin domain-containing protein.
      
 0.418
C1H46_003494
EGF-like domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.418
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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