STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_015583MATH domain-containing protein. (404 aa)    
Predicted Functional Partners:
C1H46_013024
Ubiquitin-like domain-containing protein.
    
  0.805
C1H46_008205
Ubiquitin-like domain-containing protein.
    
  0.805
C1H46_032060
HECT domain-containing protein.
   
 
 0.743
C1H46_013916
HECT domain-containing protein.
   
 
 0.743
C1H46_004999
Uncharacterized protein.
   
 
 0.743
C1H46_001279
HECT domain-containing protein.
   
 
 0.743
C1H46_042356
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
   
 
 0.661
C1H46_035069
Ubiquitin-like domain-containing protein.
    
  0.607
C1H46_022435
Ubiquitin-like domain-containing protein.
    
  0.607
C1H46_006745
Ubiquitin-like domain-containing protein.
    
  0.607
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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