STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_015100Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
C1H46_016186
Uncharacterized protein.
  
    0.696
C1H46_003409
C3H1-type domain-containing protein.
  
     0.491
C1H46_029897
CRM domain-containing protein.
  
     0.474
C1H46_028950
LEA_2 domain-containing protein.
  
     0.470
C1H46_003401
C3H1-type domain-containing protein.
  
     0.463
C1H46_038099
RNA_GG_bind domain-containing protein.
  
     0.459
C1H46_037713
TPR_REGION domain-containing protein.
  
    0.452
C1H46_028642
TPR_REGION domain-containing protein.
  
    0.438
C1H46_015937
Uncharacterized protein.
  
     0.430
C1H46_012588
PH domain-containing protein.
  
     0.423
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.