STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_014477Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (389 aa)    
Predicted Functional Partners:
C1H46_015780
AAA_23 domain-containing protein.
   
 0.992
C1H46_014277
zf-RING-like domain-containing protein.
   
 0.992
C1H46_022817
AAA_23 domain-containing protein.
   
 0.989
C1H46_001366
SMC_N domain-containing protein.
   
 0.989
C1H46_040897
SP-RING-type domain-containing protein.
    
 0.964
C1H46_009445
SP-RING-type domain-containing protein.
    
 0.964
C1H46_005734
SP-RING-type domain-containing protein.
    
 0.964
C1H46_016921
Uncharacterized protein.
    
 0.947
C1H46_016920
Uncharacterized protein.
    
 0.947
C1H46_014594
Uncharacterized protein.
    
 0.947
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
Server load: low (24%) [HD]