STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_010296Methyltransf_21 domain-containing protein. (491 aa)    
Predicted Functional Partners:
C1H46_032860
Uncharacterized protein.
  
  
 0.592
C1H46_014951
Uncharacterized protein.
  
  
 0.587
C1H46_039715
Uncharacterized protein.
  
     0.509
C1H46_030820
Uncharacterized protein.
  
     0.498
C1H46_007789
zf-Di19 domain-containing protein.
  
     0.497
C1H46_020739
RRM domain-containing protein.
  
     0.495
C1H46_045853
FH2 domain-containing protein.
  
     0.492
C1H46_040844
Uncharacterized protein.
  
     0.491
C1H46_031123
F-box domain-containing protein.
  
     0.491
C1H46_030819
Uncharacterized protein.
  
     0.491
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.