Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1H46_008883 | C1H46_009424 | A0A540N319 | A0A540N330 | BTP domain-containing protein. | NAC domain-containing protein. | 0.543 |
C1H46_008883 | C1H46_029094 | A0A540N319 | A0A540LGD8 | BTP domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.550 |
C1H46_008883 | C1H46_031245 | A0A540N319 | A0A540L9Q9 | BTP domain-containing protein. | SBP-type domain-containing protein. | 0.400 |
C1H46_008883 | C1H46_037525 | A0A540N319 | A0A540KSD8 | BTP domain-containing protein. | Uncharacterized protein. | 0.575 |
C1H46_008883 | C1H46_039300 | A0A540N319 | A0A540KLT4 | BTP domain-containing protein. | TF-B3 domain-containing protein. | 0.596 |
C1H46_009424 | C1H46_008883 | A0A540N330 | A0A540N319 | NAC domain-containing protein. | BTP domain-containing protein. | 0.543 |
C1H46_009424 | C1H46_009808 | A0A540N330 | A0A540N0P3 | NAC domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.555 |
C1H46_009424 | C1H46_013318 | A0A540N330 | A0A540MQI2 | NAC domain-containing protein. | TCP domain-containing protein. | 0.646 |
C1H46_009424 | C1H46_020977 | A0A540N330 | A0A540M3V9 | NAC domain-containing protein. | Uncharacterized protein. | 0.573 |
C1H46_009424 | C1H46_026279 | A0A540N330 | A0A540LP89 | NAC domain-containing protein. | TCP domain-containing protein. | 0.620 |
C1H46_009424 | C1H46_029094 | A0A540N330 | A0A540LGD8 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.549 |
C1H46_009424 | C1H46_031245 | A0A540N330 | A0A540L9Q9 | NAC domain-containing protein. | SBP-type domain-containing protein. | 0.600 |
C1H46_009424 | C1H46_033649 | A0A540N330 | A0A540L2U9 | NAC domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.555 |
C1H46_009424 | C1H46_037525 | A0A540N330 | A0A540KSD8 | NAC domain-containing protein. | Uncharacterized protein. | 0.552 |
C1H46_009424 | C1H46_039300 | A0A540N330 | A0A540KLT4 | NAC domain-containing protein. | TF-B3 domain-containing protein. | 0.560 |
C1H46_009808 | C1H46_009424 | A0A540N0P3 | A0A540N330 | GRAS domain-containing protein; Belongs to the GRAS family. | NAC domain-containing protein. | 0.555 |
C1H46_013318 | C1H46_009424 | A0A540MQI2 | A0A540N330 | TCP domain-containing protein. | NAC domain-containing protein. | 0.646 |
C1H46_013318 | C1H46_029094 | A0A540MQI2 | A0A540LGD8 | TCP domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.483 |
C1H46_013318 | C1H46_031245 | A0A540MQI2 | A0A540L9Q9 | TCP domain-containing protein. | SBP-type domain-containing protein. | 0.521 |
C1H46_013318 | C1H46_039300 | A0A540MQI2 | A0A540KLT4 | TCP domain-containing protein. | TF-B3 domain-containing protein. | 0.597 |
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