STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_009424NAC domain-containing protein. (343 aa)    
Predicted Functional Partners:
C1H46_013318
TCP domain-containing protein.
  
 
 
 0.646
C1H46_026279
TCP domain-containing protein.
  
 
 
 0.620
C1H46_031245
SBP-type domain-containing protein.
  
 
 
 0.600
C1H46_020977
Uncharacterized protein.
  
 
 
 0.573
C1H46_039300
TF-B3 domain-containing protein.
  
 
 
 0.560
C1H46_033649
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.555
C1H46_009808
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.555
C1H46_037525
Uncharacterized protein.
  
 
  0.552
C1H46_029094
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.549
C1H46_008883
BTP domain-containing protein.
  
 
   0.543
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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