STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_0069225'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1113 aa)    
Predicted Functional Partners:
C1H46_023202
RAI1 domain-containing protein.
   
 
 0.896
C1H46_021618
RAI1 domain-containing protein.
   
 
 0.896
C1H46_010016
RAI1 domain-containing protein.
   
 
 0.896
C1H46_041870
Uncharacterized protein.
    
 0.814
C1H46_041874
Uncharacterized protein.
    
 0.814
C1H46_041628
Uncharacterized protein.
    
 0.814
C1H46_021235
Uncharacterized protein.
    
 0.814
C1H46_001211
Uncharacterized protein.
    
 0.814
C1H46_044571
Uncharacterized protein.
    
 
 0.804
C1H46_042362
CID domain-containing protein.
    
 
 0.804
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.