STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_005335Malate dehydrogenase. (333 aa)    
Predicted Functional Partners:
C1H46_024112
Citrate synthase; Belongs to the citrate synthase family.
  
 0.982
C1H46_029176
Uncharacterized protein.
  
 0.976
C1H46_029396
Citrate synthase; Belongs to the citrate synthase family.
  
 0.976
C1H46_006116
Citrate synthase; Belongs to the citrate synthase family.
  
 0.976
C1H46_043974
Malic_M domain-containing protein.
  
 0.968
C1H46_031866
Malic enzyme.
  
 0.965
C1H46_007523
Ldh_1_N domain-containing protein.
   
 0.963
C1H46_002130
Malic enzyme.
  
 0.955
C1H46_008377
Ldh_1_N domain-containing protein.
   
 0.951
C1H46_040496
Malate dehydrogenase.
   
 0.948
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.