STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_004712Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family. (575 aa)    
Predicted Functional Partners:
C1H46_025707
Uncharacterized protein.
  
 
  0.908
C1H46_041472
Uncharacterized protein.
  
  
  0.907
C1H46_030964
Pectate lyase.
  
 
  0.906
C1H46_031260
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.895
C1H46_014881
Pectate lyase.
  
 
  0.892
C1H46_017269
Uncharacterized protein.
  
  
  0.886
C1H46_043247
Uncharacterized protein.
  
  
 0.881
C1H46_016347
Uncharacterized protein.
  
  
 0.880
C1H46_011342
Uncharacterized protein.
  
  
 0.880
C1H46_023738
Uncharacterized protein.
  
  
 0.877
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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