STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_004305Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
C1H46_045664
Uncharacterized protein.
  
     0.500
C1H46_030444
VQ domain-containing protein.
   
    0.499
C1H46_004106
VQ domain-containing protein.
   
    0.499
C1H46_010846
Myb_CC_LHEQLE domain-containing protein.
  
     0.488
C1H46_026812
Uncharacterized protein.
  
     0.471
C1H46_028646
Uncharacterized protein.
  
     0.469
C1H46_006680
Uncharacterized protein.
  
     0.469
C1H46_006678
Uncharacterized protein.
  
     0.469
C1H46_014235
Uncharacterized protein.
  
     0.468
C1H46_023829
Uncharacterized protein.
  
     0.467
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.