STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_004334Uncharacterized protein; Belongs to the protein kinase superfamily. (495 aa)    
Predicted Functional Partners:
C1H46_027601
Uncharacterized protein.
   
 
 0.908
C1H46_035375
Uncharacterized protein.
   
 
 0.907
C1H46_014365
Uncharacterized protein.
   
 
 0.907
C1H46_039613
Uncharacterized protein.
   
 
 0.890
C1H46_007426
Uncharacterized protein.
   
 
 0.890
C1H46_024903
Uncharacterized protein.
   
 
 0.889
C1H46_020684
Uncharacterized protein.
   
 
 0.889
C1H46_035804
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.676
C1H46_035228
Uncharacterized protein.
   
 0.640
C1H46_024442
SER_THR_PHOSPHATASE domain-containing protein.
    
 0.638
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.