STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_003511Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
C1H46_021433
Uncharacterized protein.
  
 0.996
C1H46_012175
Uncharacterized protein.
  
 0.996
C1H46_044063
Uncharacterized protein.
     
 0.560
C1H46_025510
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
  
 0.532
C1H46_012409
Ribosomal_TL5_C domain-containing protein.
  
  
 0.511
C1H46_040581
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
      
 0.491
C1H46_043567
F-box domain-containing protein.
     
 0.481
C1H46_042253
Uncharacterized protein.
     
 0.481
C1H46_006375
Uncharacterized protein.
     
 0.481
C1H46_026382
t-SNARE coiled-coil homology domain-containing protein.
     
 0.481
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.