STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_002952Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
C1H46_040581
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.922
C1H46_004165
Uncharacterized protein.
   
 
 0.921
C1H46_029358
Uncharacterized protein.
    
   0.920
C1H46_006084
Uncharacterized protein.
    
   0.920
C1H46_017281
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.896
C1H46_034546
Uncharacterized protein.
   
 
 0.888
C1H46_003265
Uncharacterized protein.
   
 
 0.882
C1H46_036138
Uncharacterized protein.
   
 
 0.842
C1H46_027461
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 
 0.822
C1H46_023119
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 
 0.822
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.