STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_002876Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
C1H46_033337
Uncharacterized protein.
   
   0.517
C1H46_015322
Uncharacterized protein.
   
   0.517
C1H46_007081
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
     0.509
C1H46_032855
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
     0.508
psbE
Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.
   
 0.496
C1H46_031200
Uncharacterized protein.
   
 0.496
C1H46_031017
Uncharacterized protein.
   
   0.466
C1H46_027146
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.466
C1H46_010843
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.466
C1H46_040580
Ribosomal_L2_C domain-containing protein.
   
 
 0.460
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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