STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H46_001942Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
C1H46_007209
S5A_REDUCTASE domain-containing protein.
     
 0.792
C1H46_030708
ATP-grasp domain-containing protein.
     
 0.774
C1H46_004609
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
 0.774
C1H46_035753
Uncharacterized protein.
  
 
 0.763
C1H46_030609
Elf4 domain-containing protein.
  
 
 0.763
C1H46_009600
Elf4 domain-containing protein.
  
 
 0.763
C1H46_025570
ETF domain-containing protein.
    
 0.756
C1H46_025005
Uncharacterized protein.
    
 0.751
C1H46_004747
Uncharacterized protein.
    
 0.751
C1H46_029026
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
    
 0.743
Your Current Organism:
Malus baccata
NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi
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