Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1H46_000379 | C1H46_001918 | A0A540NSG8 | A0A540NNA9 | Sm domain-containing protein. | Uncharacterized protein. | 0.975 |
C1H46_000379 | C1H46_003364 | A0A540NSG8 | A0A540NIW2 | Sm domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.997 |
C1H46_000379 | C1H46_004248 | A0A540NSG8 | A0A540NGI1 | Sm domain-containing protein. | Matrin-type domain-containing protein. | 0.992 |
C1H46_000379 | C1H46_007324 | A0A540NSG8 | A0A540N7N6 | Sm domain-containing protein. | Uncharacterized protein. | 0.988 |
C1H46_000379 | C1H46_019402 | A0A540NSG8 | A0A540M8B0 | Sm domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.997 |
C1H46_000379 | C1H46_023484 | A0A540NSG8 | A0A540LWS7 | Sm domain-containing protein. | Uncharacterized protein. | 0.997 |
C1H46_000379 | C1H46_036269 | A0A540NSG8 | A0A540KVE7 | Sm domain-containing protein. | Uncharacterized protein. | 0.997 |
C1H46_000379 | C1H46_036565 | A0A540NSG8 | A0A540KUJ7 | Sm domain-containing protein. | RRM domain-containing protein. | 0.997 |
C1H46_000379 | C1H46_042911 | A0A540NSG8 | A0A540KBF3 | Sm domain-containing protein. | Uncharacterized protein. | 0.997 |
C1H46_000379 | C1H46_044149 | A0A540NSG8 | A0A540K7Y6 | Sm domain-containing protein. | RRM domain-containing protein. | 0.997 |
C1H46_001918 | C1H46_000379 | A0A540NNA9 | A0A540NSG8 | Uncharacterized protein. | Sm domain-containing protein. | 0.975 |
C1H46_001918 | C1H46_003364 | A0A540NNA9 | A0A540NIW2 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.970 |
C1H46_001918 | C1H46_004248 | A0A540NNA9 | A0A540NGI1 | Uncharacterized protein. | Matrin-type domain-containing protein. | 0.975 |
C1H46_001918 | C1H46_007324 | A0A540NNA9 | A0A540N7N6 | Uncharacterized protein. | Uncharacterized protein. | 0.968 |
C1H46_001918 | C1H46_019402 | A0A540NNA9 | A0A540M8B0 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.970 |
C1H46_001918 | C1H46_023484 | A0A540NNA9 | A0A540LWS7 | Uncharacterized protein. | Uncharacterized protein. | 0.973 |
C1H46_001918 | C1H46_036269 | A0A540NNA9 | A0A540KVE7 | Uncharacterized protein. | Uncharacterized protein. | 0.966 |
C1H46_001918 | C1H46_036565 | A0A540NNA9 | A0A540KUJ7 | Uncharacterized protein. | RRM domain-containing protein. | 0.974 |
C1H46_001918 | C1H46_042911 | A0A540NNA9 | A0A540KBF3 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
C1H46_001918 | C1H46_044149 | A0A540NNA9 | A0A540K7Y6 | Uncharacterized protein. | RRM domain-containing protein. | 0.974 |
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