STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nexnNexilin (F actin binding protein). (837 aa)    
Predicted Functional Partners:
ebna1bp2
EBNA1 binding protein 2.
   
 
 0.966
rpf1
Ribosome production factor 1 homolog.
   
 
 0.959
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.959
LOC101482433
Uncharacterized protein.
   
 
 0.959
LOC101468329
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.957
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.956
brix1
Brix domain containing 2.
   
 
 0.947
rrp15
Ribosomal RNA processing 15 homolog.
   
 
 0.945
ppan
Peter pan homolog.
   
 
 0.918
p2ry11
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.918
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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