Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSMZEP00005000235 | LOC101481499 | ENSMZEP00005000235 | ENSMZEP00005026332 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Mitochondrial transcription termination factor 4. | 0.707 |
ENSMZEP00005000235 | mrpl19 | ENSMZEP00005000235 | ENSMZEP00005024276 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Mitochondrial ribosomal protein L19. | 0.999 |
ENSMZEP00005000235 | mrpl20 | ENSMZEP00005000235 | ENSMZEP00005015162 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. | 0.999 |
ENSMZEP00005000235 | mrrf | ENSMZEP00005000235 | ENSMZEP00005023932 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Mitochondrial ribosome recycling factor. | 0.987 |
ENSMZEP00005000235 | mterf3 | ENSMZEP00005000235 | ENSMZEP00005005565 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | Mitochondrial transcription termination factor 3. | 0.728 |
LOC101481499 | ENSMZEP00005000235 | ENSMZEP00005026332 | ENSMZEP00005000235 | Mitochondrial transcription termination factor 4. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.707 |
LOC101481499 | ddx28 | ENSMZEP00005026332 | ENSMZEP00005012356 | Mitochondrial transcription termination factor 4. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | 0.512 |
LOC101481499 | fastkd2 | ENSMZEP00005026332 | ENSMZEP00005007645 | Mitochondrial transcription termination factor 4. | FAST kinase domains 2. | 0.408 |
LOC101481499 | mrpl19 | ENSMZEP00005026332 | ENSMZEP00005024276 | Mitochondrial transcription termination factor 4. | Mitochondrial ribosomal protein L19. | 0.704 |
LOC101481499 | mrpl20 | ENSMZEP00005026332 | ENSMZEP00005015162 | Mitochondrial transcription termination factor 4. | Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. | 0.686 |
LOC101481499 | mterf3 | ENSMZEP00005026332 | ENSMZEP00005005565 | Mitochondrial transcription termination factor 4. | Mitochondrial transcription termination factor 3. | 0.661 |
LOC101481499 | polrmt | ENSMZEP00005026332 | ENSMZEP00005013217 | Mitochondrial transcription termination factor 4. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.671 |
ddx28 | LOC101481499 | ENSMZEP00005012356 | ENSMZEP00005026332 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Mitochondrial transcription termination factor 4. | 0.512 |
ddx28 | fastkd2 | ENSMZEP00005012356 | ENSMZEP00005007645 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | FAST kinase domains 2. | 0.775 |
ddx28 | mrpl19 | ENSMZEP00005012356 | ENSMZEP00005024276 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Mitochondrial ribosomal protein L19. | 0.671 |
ddx28 | mrpl20 | ENSMZEP00005012356 | ENSMZEP00005015162 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. | 0.819 |
ddx28 | mterf3 | ENSMZEP00005012356 | ENSMZEP00005005565 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | Mitochondrial transcription termination factor 3. | 0.700 |
ddx28 | polrmt | ENSMZEP00005012356 | ENSMZEP00005013217 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.496 |
ddx28 | tfb2m | ENSMZEP00005012356 | ENSMZEP00005013906 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.597 |
fastkd2 | LOC101481499 | ENSMZEP00005007645 | ENSMZEP00005026332 | FAST kinase domains 2. | Mitochondrial transcription termination factor 4. | 0.408 |
page 1 of 3