STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101474417Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
ENSMZEP00005002693
Uncharacterized protein.
 
      0.566
rnf2
Ring finger protein 2.
    
 0.556
RING1
Ring finger protein 1.
    
 0.556
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.555
pcgf2
Polycomb group ring finger 2.
    
 0.549
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.549
LOC101467917
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.529
ENSMZEP00005008823
Chromo domain-containing protein.
    
 0.529
cbx8
Chromobox homolog 8b.
    
 0.529
scmh1
SAM domain-containing protein.
    
0.505
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.