STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMZEP00005013700Si:ch211-197l9.5. (317 aa)    
Predicted Functional Partners:
LOC101471783
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.570
prkab1
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.570
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.570
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.563
LOC101480396
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.516
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.516
LOC101485259
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.516
LOC101482213
Uncharacterized protein.
   
 0.516
LOC101467149
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.516
tsc2
TSC complex subunit 2.
    
 0.462
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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