STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
httHuntingtin. (2575 aa)    
Predicted Functional Partners:
LOC101483630
Zgc:101679.
    
 
 0.932
optn
Optineurin.
    
 
 0.859
LOC101467023
CREB binding protein a.
   
 0.810
crebbp
CREB binding protein b.
   
 0.810
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 0.788
prpf40a
PRP40 pre-mRNA processing factor 40 homolog A.
    
 0.779
sqstm1
Sequestosome 1.
    
 
 0.775
hypk
Huntingtin interacting protein K.
    
 
 0.770
LOC101468074
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.728
Gsap
GSAP-16 domain-containing protein.
    
 
 0.725
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.