mon1a protein (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mon1a

MON1 secretory trafficking family member A. (519 aa)

Predicted Functional Partners:

ccz1

0.967

vps41

0.898

LOC101469527

0.726

LOC101468851

0.726

LOC101464763

0.726

RAB9A

0.708

LOC101486296

0.708

ENSMZEP00005013795

0.708

ENSMZEP00005028341

0.708

armc5

0.708

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005013795	ENSMZEP00005028341	ENSMZEP00005013795	ENSMZEP00005028341	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.907
ENSMZEP00005013795	RAB9A	ENSMZEP00005013795	ENSMZEP00005003234	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.906
ENSMZEP00005013795	ccz1	ENSMZEP00005013795	ENSMZEP00005011547	RAB9B, member RAS oncogene family.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.841
ENSMZEP00005013795	mon1a	ENSMZEP00005013795	ENSMZEP00005013993	RAB9B, member RAS oncogene family.	MON1 secretory trafficking family member A.	0.708
ENSMZEP00005013795	vps41	ENSMZEP00005013795	ENSMZEP00005024454	RAB9B, member RAS oncogene family.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.847
ENSMZEP00005028341	ENSMZEP00005013795	ENSMZEP00005028341	ENSMZEP00005013795	Uncharacterized protein.	RAB9B, member RAS oncogene family.	0.907
ENSMZEP00005028341	RAB9A	ENSMZEP00005028341	ENSMZEP00005003234	Uncharacterized protein.	RAB9A, member RAS oncogene family.	0.901
ENSMZEP00005028341	ccz1	ENSMZEP00005028341	ENSMZEP00005011547	Uncharacterized protein.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.841
ENSMZEP00005028341	mon1a	ENSMZEP00005028341	ENSMZEP00005013993	Uncharacterized protein.	MON1 secretory trafficking family member A.	0.708
ENSMZEP00005028341	vps41	ENSMZEP00005028341	ENSMZEP00005024454	Uncharacterized protein.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.847
LOC101464763	ccz1	ENSMZEP00005014603	ENSMZEP00005011547	RAB7a, member RAS oncogene family.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.871
LOC101464763	mon1a	ENSMZEP00005014603	ENSMZEP00005013993	RAB7a, member RAS oncogene family.	MON1 secretory trafficking family member A.	0.726
LOC101468851	ccz1	ENSMZEP00005012540	ENSMZEP00005011547	Uncharacterized protein.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.871
LOC101468851	mon1a	ENSMZEP00005012540	ENSMZEP00005013993	Uncharacterized protein.	MON1 secretory trafficking family member A.	0.726
LOC101469527	ccz1	ENSMZEP00005012528	ENSMZEP00005011547	Uncharacterized protein.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.871
LOC101469527	mon1a	ENSMZEP00005012528	ENSMZEP00005013993	Uncharacterized protein.	MON1 secretory trafficking family member A.	0.726
LOC101486296	ccz1	ENSMZEP00005013582	ENSMZEP00005011547	Si:dkey-13a21.4.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.841
LOC101486296	mon1a	ENSMZEP00005013582	ENSMZEP00005013993	Si:dkey-13a21.4.	MON1 secretory trafficking family member A.	0.708
LOC101486296	vps41	ENSMZEP00005013582	ENSMZEP00005024454	Si:dkey-13a21.4.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.847
RAB9A	ENSMZEP00005013795	ENSMZEP00005003234	ENSMZEP00005013795	RAB9A, member RAS oncogene family.	RAB9B, member RAS oncogene family.	0.906